tellurium.tests package

Subpackages

• tellurium.tests.testdata package
  • Module contents

Submodules

tellurium.tests.test_API module

Here the supported API is tested.

class tellurium.tests.test_API.APITestCase(methodName='runTest')

Bases: unittest.case.TestCase

test_api000_te_getVersionInfo()

Test fails if class or function is not callable under the given name str.

test_api001_te_printVersionInfo()

Test fails if class or function is not callable under the given name str.

test_api002_te_getTelluriumVersion()

Test fails if class or function is not callable under the given name str.

test_api003_te_noticesOff()

Test fails if class or function is not callable under the given name str.

test_api004_te_noticesOn()

Test fails if class or function is not callable under the given name str.

test_api005_te_saveToFile()

Test fails if class or function is not callable under the given name str.

test_api006_te_readFromFile()

Test fails if class or function is not callable under the given name str.

test_api007_te_loada()

Test fails if class or function is not callable under the given name str.

test_api008_te_loadAntimonyModel()

Test fails if class or function is not callable under the given name str.

test_api009_te_loads()

Test fails if class or function is not callable under the given name str.

test_api010_te_loadSBMLModel()

Test fails if class or function is not callable under the given name str.

test_api011_te_antimonyToSBML()

Test fails if class or function is not callable under the given name str.

test_api012_te_sbmlToAntimony()

Test fails if class or function is not callable under the given name str.

test_api013_te_getEigenvalues()

Test fails if class or function is not callable under the given name str.

test_api014_te_plotArray()

Test fails if class or function is not callable under the given name str.

test_api015_te_loadTestModel()

Test fails if class or function is not callable under the given name str.

test_api016_te_getTestModel()

Test fails if class or function is not callable under the given name str.

test_api017_te_listTestModels()

Test fails if class or function is not callable under the given name str.

test_api018_te_LatexExport()

Test fails if class or function is not callable under the given name str.

test_api019_te_ParameterScan()

Test fails if class or function is not callable under the given name str.

test_api020_te_SteadyStateScan()

Test fails if class or function is not callable under the given name str.

test_api021_r_getAntimony()

Test fails if class or function is not callable under the given name str.

test_api022_r_getCurrentAntimony()

Test fails if class or function is not callable under the given name str.

test_api023_r_getCellML()

Test fails if class or function is not callable under the given name str.

test_api024_r_getCurrentCellML()

Test fails if class or function is not callable under the given name str.

test_api025_r_getMatlab()

Test fails if class or function is not callable under the given name str.

test_api026_r_getCurrentMatlab()

Test fails if class or function is not callable under the given name str.

test_api027_r_exportToAntimony()

Test fails if class or function is not callable under the given name str.

test_api028_r_exportToCellML()

Test fails if class or function is not callable under the given name str.

test_api029_r_exportToMatlab()

Test fails if class or function is not callable under the given name str.

test_api030_r_resetToOrigin()

Test fails if class or function is not callable under the given name str.

test_api031_r_resetAll()

Test fails if class or function is not callable under the given name str.

test_api032_r_getRatesOfChange()

Test fails if class or function is not callable under the given name str.

test_api033_r_draw()

Test fails if class or function is not callable under the given name str.

test_api034_r_plot()

Test fails if class or function is not callable under the given name str.

test_api035_r_getSeed()

Test fails if class or function is not callable under the given name str.

test_api036_r_setSeed()

Test fails if class or function is not callable under the given name str.

test_api037_r_gillespie()

Test fails if class or function is not callable under the given name str.

test_api038_r_fjac()

Test fails if class or function is not callable under the given name str.

test_api039_r_sm()

Test fails if class or function is not callable under the given name str.

test_api040_r_rs()

Test fails if class or function is not callable under the given name str.

test_api041_r_fs()

Test fails if class or function is not callable under the given name str.

test_api042_r_bs()

Test fails if class or function is not callable under the given name str.

test_api043_r_ps()

Test fails if class or function is not callable under the given name str.

test_api044_r_vs()

Test fails if class or function is not callable under the given name str.

test_api045_r_dv()

Test fails if class or function is not callable under the given name str.

test_api046_r_rv()

Test fails if class or function is not callable under the given name str.

test_api047_r_sv()

Test fails if class or function is not callable under the given name str.

test_api048_r_getBoundarySpeciesConcentrations()

Test fails if class or function is not callable under the given name str.

test_api049_r_getBoundarySpeciesIds()

Test fails if class or function is not callable under the given name str.

test_api050_r_getNumBoundarySpecies()

Test fails if class or function is not callable under the given name str.

test_api051_r_getFloatingSpeciesConcentrations()

Test fails if class or function is not callable under the given name str.

test_api052_r_getFloatingSpeciesIds()

Test fails if class or function is not callable under the given name str.

test_api053_r_getNumFloatingSpecies()

Test fails if class or function is not callable under the given name str.

test_api054_r_getGlobalParameterIds()

Test fails if class or function is not callable under the given name str.

test_api055_r_getGlobalParameterValues()

Test fails if class or function is not callable under the given name str.

test_api056_r_getNumGlobalParameters()

Test fails if class or function is not callable under the given name str.

test_api057_r_getCompartmentIds()

Test fails if class or function is not callable under the given name str.

test_api058_r_getCompartmentVolumes()

Test fails if class or function is not callable under the given name str.

test_api059_r_getNumCompartments()

Test fails if class or function is not callable under the given name str.

test_api060_r_getConservedMoietyValues()

Test fails if class or function is not callable under the given name str.

test_api061_r_getNumConservedMoieties()

Test fails if class or function is not callable under the given name str.

test_api062_r_getNumDepFloatingSpecies()

Test fails if class or function is not callable under the given name str.

test_api063_r_getNumIndFloatingSpecies()

Test fails if class or function is not callable under the given name str.

test_api064_r_getReactionIds()

Test fails if class or function is not callable under the given name str.

test_api065_r_getReactionRates()

Test fails if class or function is not callable under the given name str.

test_api066_r_getNumReactions()

Test fails if class or function is not callable under the given name str.

test_api067_r_getNumEvents()

Test fails if class or function is not callable under the given name str.

test_api068_r_getNumRateRules()

Test fails if class or function is not callable under the given name str.

test_api069_te_loadCellMLModel()

Test fails if class or function is not callable under the given name str.

test_api070_te_cellmlToAntimony()

Test fails if class or function is not callable under the given name str.

test_api071_te_cellmlToSBML()

Test fails if class or function is not callable under the given name str.

test_api072_te_antimonyToCellML()

Test fails if class or function is not callable under the given name str.

test_api073_te_sbmlToCellML()

Test fails if class or function is not callable under the given name str.

tellurium.tests.test_API.ftest_generator(name)

tellurium.tests.test_API.test(self=None)

Test fails if class or function is not callable under the given name str.

tellurium.tests.test_analysis module

class tellurium.tests.test_analysis.MyTestCase(methodName='runTest')

Bases: unittest.case.TestCase

setUp()

tearDown()

test_plot2DParameterScan()

Test plot2DParameterScan.

tellurium.tests.test_examples module

Unittests for examples. All examples are executed to check against latest code base.

tellurium.tests.test_examples.ftest_generator(filePath)

tellurium.tests.test_io module

Test the latex export.

class tellurium.tests.test_io.ExportTestCase(methodName='runTest')

Bases: unittest.case.TestCase

test_latex_export()

Test latex export.

test_latex_export2()

Test latex export.

tellurium.tests.test_runner module

Test utilities for tellurium.

class tellurium.tests.test_runner.TestRunner

Bases: object

Test modules have the pattern test_*.py and must be located in the directory of this module.

static find_test_modules()

static run_all()

Run all unittests of tellurium.

Returns:results of unittest Return type:unittest.TextTestResult

te_passes_tests()

Did tellurium pass the tests?

import tellurium.tests.test_runner as tetest
runner = tetest.TestRunner()
runner.te_passes_tests()

Returns:True if passed Return type:bool

tellurium.tests.test_tecombine module

tellurium.tests.test_tellurium module

Unittests for tellurium.py Main module for tests.

class tellurium.tests.test_tellurium.TelluriumTestCase(methodName='runTest')

Bases: unittest.case.TestCase

setUp()

tearDown()

test_README_example()

Tests the source example in the main README.md.

test_antimonyToCellML_file()

test_antimonyToCellML_str()

test_antimonyToSBML_file()

test_antimonyToSBML_str()

test_cellmlToAntimony_file()

test_cellmlToAntimony_str()

test_cellmlToSBML_file()

test_cellmlToSBML_str()

test_complex_simulation()

Test complex simulation.

test_draw()

test_getSeed()

test_getTelluriumVersionInfo()

test_getTestModel()

test_jarnac_bs()

test_jarnac_dv()

test_jarnac_fjac()

test_jarnac_fs()

test_jarnac_ps()

test_jarnac_rs()

test_jarnac_rv()

test_jarnac_sm()

test_jarnac_sv()

test_jarnac_vs()

test_listTestModels()

test_loadAntimonyModel_file()

test_loadAntimonyModel_str()

test_loadCellMLModel_file(*args, **kwargs)

test_loadCellMLModel_str(*args, **kwargs)

test_loadSBMLModel_file()

test_loadSBMLModel_str()

test_loadTestModel()

test_loada()

test_loada_file()

test_loada_str()

test_loads_file()

test_loads_str()

test_plot()

Regression tests for plotting. The following calls should work.

test_roadrunner()

test_roadrunner_tests()

Run the roadrunner tests.

test_sbmlToAntimony_file()

test_sbmlToAntimony_str()

test_sbmlToCellML_file()

test_sbmlToCellML_str()

test_seed()

test_setSeed()

tellurium.tests.test_tephrasedml module

tellurium.tests.test_tesedml module

Module contents